BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022B12LP1|AL427868
(492 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1399 932 0.0
>3x_Contig1399
Length = 7157
Score = 932 bits (466), Expect = 0.0
Identities = 482/492 (97%)
Strand = Plus / Minus
Query: 1 ctcgcagtaagtctaaawcggatttgaatctgttgaatcgtactccaaatattgtgagca 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4020 ctcgcagtaagtctaattcggatttgaatctgttgaatcgtactccaaatattgtgagct 3961
Query: 61 attcgtcggaaagggacatcgatgagacaatcttatccaacctacagatcctatggcacg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3960 tttcgtcggaaagggacatcgatgagacaatcttatccaacctacagatcctatggcacg 3901
Query: 121 gtgctgcaaggaaacatttggtgacaagacttatgamaccaggattcactgaagagaaaa 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3900 gtgctgcaaggaaacatttggtgacaagacttatgaaaccaggattcactgaagagaaaa 3841
Query: 181 tgttttattctttactatggaattatcaggagaaacaacagaaatcgatgcaaaaggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3840 tgttttattctttactatggaattatcaggagaaacaacagaaatcgatgcaaaaggatt 3781
Query: 241 taatacctgttcctacgttgaaaacatcgtccgcttcctcggtcagtccattgaatattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3780 taatacctgttcctacgttgaaaacatcgtccgcttcctcggtcagtccattgaatattt 3721
Query: 301 catctgatgtgaatagtgtaacaaatacagcgaaamaacaacaacaatcaagtaacggaa 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3720 catctgatgtgaatagtgtaacaaatacagcgaaaaaacaacaacaatcaagtaacggaa 3661
Query: 361 ctgtactgccagcmtcgatggctccaacaatatcggcctttggacaacaaatatcatctg 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3660 ctgtactgccagcatcgatggctccaacaatatcggcctttggacaacaaatatcatctg 3601
Query: 421 ayagtyctgaatctagtaccctacaggctccaaagatccaccagavatcacatttctcga 480
| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3600 atagttctgaatctagtaccctacaggctccaaagatccaccagaaatcacatttctcga 3541
Query: 481 taagttccttga 492
||||||||||||
Sbjct: 3540 taagttccttga 3529
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3656
Number of Sequences: 1807
Number of extensions: 3656
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 1
length of query: 492
length of database: 10,358,551
effective HSP length: 15
effective length of query: 477
effective length of database: 10,331,446
effective search space: 4928099742
effective search space used: 4928099742
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)